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2006-2010

Agarwal S & Grover A 2006. Molecular biology, biotechnology and genomics of flooding-associated low O2 stress response in plants. Criti. Rev. plant Sci. 25: 11-21.

Blumwald E & Grover A 2006. Salt tolerance. In: Nigel, G. & Halford, J. (eds.) Plant Biotechnology: Current and Future Uses of Genetically Modified Crops. pp. 206-224 John Wiley & Sons Ltd., U.K.

Chatterjee M, Sharma P & Khurana JP 2006. CRYPTOCHROME 1 from Brassica napus is upregulated by blue light and controls hypocotyls/stem growth and anthocyanin accumulation. Plant Physiol. 141: 61-74.

Jain M, Kaur N, Garg R, Thakur JK, Tyagi AK & Khurana JP 2006. Structure and expression analysis of early auxin responsive Aux/IAA gene family in rice (Oryza sativa). Functional & Integrative Genomics 6: 47-59.

Jain M, Kaur N, Tyagi AK & Khurana JP 2006. Comprehensive analysis of early auxin -responsive GH3 gene family in rice (Oryza sativa). Functional & Integrative Genomics 6: 36-46.

Jain M, Tyagi AK & Khurana JP 2006. Molecular characterization and differential expression of cytokinin-responsive type-A response regulators in rice (Oryza sativa). BMC Plant Biology 6: 1-11.

Jain M, Tyagi AK & Khurana JP 2006. Genome -wide analysis, evolutionary expansion and expression of early auxin-responsive SAUR gene family in rice (Oryza sativa). Genomics 88: 360-371.

Jain M, Tyagi AK & Khurana JP 2006. The overexpression of putative topoisomerase 6 genes from rice confers stress tolerance in transgenic Arabidopsis plants. FEBS J. 273: 5245-5260.

Jain M, Nijhawan A, Tyagi AK & Khurana JP 2006. Validation of housekeeping genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochem. Biophys. Res. Commun. 345: 646-651.

Kapoor S & Takatuji H 2006. Sequencing of an anther specific gene Zinc-finger gene, MEZ1, causes aberrant meiosis and pollen abortion in petunia. Plant Mol. Biol. 6: 415-430.

Khurana JP & Jain M 2006. Understanding plant reproductive pathways-molecular genetic analysis of floral induction and flower development. In: Proceedings of Dr. B.P. Pal Memorial Symposium NAAS, pp 291-316 New Delhi.

Kumar N, Kulwal PL, Gaur A, Tyagi AK, Khurana JP, Khurana P, Balyan HS & Gupta PK 2006. QTL analysis for grain weight in common wheat. Euphytica 151:135-144

Lal S, Bhatnagar S & Khurana P 2006. Screening of Indian mulberry for abiotic stress tolerance and ameliorative effect of calcium chloride on salinity stress. Physiol. Mol. Biol. Plants 12: 193-199.

Laxmi A, Paul LK, Raychaudhuri A, Peters J & Khurana, JP 2006. Arabidopsis cytokinin-resistant mutant, cnr1, displays altered auxin responses and sugar sensitivity. Plant Mol. Biol. 62: 409-425.

Mahalakshmi A, Khurana JP, Singla B & Khurana P. 2006. Role of calcium-calmodulin in auxin induced somatic embryogenesis in leaf base cultures of wheat (Triticum aestivum). Plant Cell Tissue & Organ Culture 88: 167-174.

Patil BL & Dasgupta I 2006. Defective interfering DNAs of Plant Viruses. Crit. Rev. plant Sci. 25: 47-64.

Patil BL, Dutt N, Briddon RW, Bull SE, Rothenstein D, Borah BK & Dasgupta I. 2006. Deletion and recombination events between the DNA-A and DNA-B components of Indian Cassava mosaic geminivirus generate defective molecules in Nicotiana benthamiana. Virus Res. 124: 59-67.

Patnaik D, Vishnudasan D & Khurana P 2006. Agrobacterium-mediated transformation of mature embryos of Triticum aestivum and T. durum. Curr. Science 91: 307-317.

Ravi V, Khurana JP, Tyagi AK & Khurana P 2006. . The chloroplast genome of mulberry (Morus indica cv. K2): complete nucleotide sequence, gene organization and comparative analysis. Tree Genetics & Genomics 3: 49-59.

Saha P, Dasgupta I & Das S 2006. A novel approach for developing resistance in rice against phloem limited viruses by antagonizing the phloem feeding hemipteran vectors. Plant Mol. Biol. 62:735-752.

Sahi C, Singh A, Blumwald E & Grover A 2006. Salt stress response in rice: genetics, molecular biology and comparative genomics. Functional & Integrative Genomics 6: 263-284.

Singla B, Chugh A, Khurana JP & Khurana P 2006. An auxin responsive AUX/IAA gene from bread Wheat (Triticum aestivum) is induced by epibrassinlide and differentially regulated by light and calcium. J. Exp. Bot. 57: 4059-4070.

Tyagi AK, Saini N & Vij S 2006. Functional genomics of stress tolerance in Plants. In: Physiology and Molecular Biology of stress tolerance. pp. 301-334. Springer, The Netherlands.

Rothenstein D, Haible D, Dagupta I, Dutt N, Patil BL & Jeske H 2006. Biodiversity and recombination of cassava-infecting begomovirus from southern India. Arch. Virol.15: 55-69.

Sarawat M, Negi MS, Lakshmikhumaran M, Tyagi AK, Das S & Srivasatava PS 2006. A standardized protocol for genomic DNA isolation from Terminalia arjuna for genetic analysis. Elect. J. Biotech. 9: 86-91.

Tyagi AK 2006. Rice genomics. Perspectives of cytology & genetics 12: 13-24.

Tyagi AK, Khurana JP, Khurana P, Kapoor S, Singh VP, Singh AK, Thakur JK, Gupta S, Anand S, Vij S, Jain M, Ray S, Agarwal P, Arora R, Sharma P, Mukherjee S, Nijhawan A, Giri J & Khurana A 2006. Expression and functional analysis of rice genes involved in reproductive development and stress response. In: Rice Genetics V 301-334 IRRI, Philippines.

Tyagi AK, Saini N & Vij S 2006. Functional genomics of stress tolerance in Plants. In: Physiology and Molecular Biology of stress tolerance. pp. 301-334. Springer, The Netherlands.

Varshney RK, Hoisington DA & Tyagi AK 2006. Advances in cereal genomics and applications in crop breeding. Trends Biotechnol. 24: 490-497.

Vij S, Gupta V, Kumar D, Ravi V, Raghuvanshi S, Khurana P, Khurana JP & Tyagi A 2006. Decoding the rice genome. Bioessays 28: 421-432.

Vij S & Tyagi AK 2006. Genome-wide analysis, expression profile and protein level interaction of the stress associated protein (SAP) gene family containing A20/AN1 zinc-finger(s) in rice and their phylogenetic relationship with Arabidopsis. MGG 276: 565-571.

Ahmed N, Saini V, Raghuvanshi S, Khurana JP, Tyagi AK, Tyagi Anil K & Hasnain SE 2007. Molecular analysis of a leprosy immunotherapeutic bacillus provides insights into Mycobacterium evolution. PLoS ONE 2: e968 (pp 1-8).

Agarwal P, Arora R, Ray S, Singh AK, Singh VP, Takatsuji H, Kapoor S & Tyagi AK 2007. Genome-wide identification of C2H2 inc-finger gene family in rice and their phylogeny and expression analysis. Plant Mol. Biol. 65: 467-485.

Agarwal S, Kapoor A, Lakshmi OS & Grover A 2007. Production of phenotypic analysis of rice transgenics with altered level of pyruvate decarboxylase and alchol dehydrogenase protein. Plant Physiol. Biochem. 45: 637-46.

Arora R, Agarwal P, Ray S, Singh A, Singh V, Tyagi AK & Kapoor S. 2007. MADS-box gene family MADS-box gene family in rice: Genome wide identification, organization and expression profiling during reproductive development and stress BMC Genomics 8: 242 (21 pages).

Batra G, Chuhan VS, Singh A, Sarkar NK & Grover A 2007. Complexity of rice HSp100 gene family: lessons from rice genome sequence data. J. Biosciences 32: 611-619.

Chauhan H, Desai SA & Khurana P 2007. Comparative analysis of the differential regeneration response of various genotype of Triticum aestivum, T. durum, and T. dicoccum. Plant Cell and Organ Culture 91:191-199.

Grover A, Chandramouli A, Agarwal S, Katiyar-Agarwal S, Agarwal M, & Sahi C 2007. Transgenic rice for tolerance against abiotic stresses. In: Datta, SK (ed.) Rice Improvement in the Genomic Era, (in press) Hawarth Press USA.

Gupta V, Khurana R & Tyagi AK 2007. Promoter of two anther-specific genes confer organ-specific expression in a stage specific manner in transgenic systems. Plant Cell Reports 26: 1919-1931.

Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK & Khurana JP 2007. F-box proteins in rice : genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol. 143: 1467-1483.

Jain M, Sharma P, Tyagi SB, Tyagi AK & Khurana JP 2007. Light regulation and differential tissue-specific expression of phototropin homologues from rice (Oryza sativa ssp. indica). Plant Science 172: 164-171.

Kathuria H, Giri J, Tyagi H & Tyagi AK 2007 Advances in transgenic rice biotechnology. Critical Rev. Plant Sciences: 26: 65-103

Khurana JP, Jain M & Tyagi AK 2007. Auxin and cytokinin signaling component genes and their potential for crop improvement. In: Varshney RK & Toberosa R (eds). Genomics-assisted Crop Improvement pp. 289-314 Springer-Verlag, Germany.

Khurana P, Lal S & Ravi V 2007. Genes and genomics for mulberry improvement. In: Proc. Regional Seminar on " Prospects and problems of Sericulture as an Economic Enterprise in North West India", In : Chakrabarti S, Khatri RK, Srivastav PK, Tayal, MK, Siddiqui AA, Babulal & Joshi DC, (eds.) pp. 154-157 Regional Sericulture Research Station, Dehradun, Central Silk Board, Govt. of India.

Khurana P & Singla B 2007. Unravelling the molecular basis of somatic embryogenesis. In: Ashwani, K. & Spory, S. (eds.) Professor Arya Memorial vol. (in press) Kluwer Publisher.

Khurana P, Chauhan H & Desai SA 2007. Wheat. In: Kole, C. & Hall, T.C. (ed.), A Compendium of Transgenic Crops, Vol.1, (18 pages) Wiley-Blackwell, US.

Kumar N, Kulwal PL, Gaur A, Tyagi AK, Khurana JP, Khurana P, Balyan HS & Gupta PK 2007. QTL analysis for grain weight in bread wheat. Euphytica 151: 135-144.

Mahalakshmi A, Singla B, Khurana JP & Khurana P 2007. Role of calcium-calmodulin in auxin-induced somatic embryogenesis in leaf base cultures of wheat (Triticum aestivum). Plant Cell Tissue & Organ Culture 88: 167-174.

Mathur S & Dasgupta I 2007. Downstream promoter sequence of an Indian isolate of Rice tungro bacilliform virus alters tissue-specific expression in host rice and acts differentially in heterologous systems. Plant Molecular Biology 65: 259-275.

Pareek A, Singla-Pareek SL, Sopory SK & Grover A 2007. Analysis of salt stress related transcriptome fingerprints from diverse plant sp. In: Varshney RK & Tuberosa R (eds.) Genomics Assisted Crop Improvement 267-287. Springer International.

Patil BL, Dutt N, Briddon RW, Bull SE, Rothenstein D, Borah BK, Dasgupta I, Stanley J & Jeske H 2007. Deletion and recombination events between the DNA-A and DNA-B components of Indian cassava-infecting geminiviruses generate defective molecules in Nicotiana benthamiana. Virus Research 124: 59-67.

Purohit SD, Raghuvanshi S & Tyagi AK 2007. Biolistic-mediated DNA delivery and transient expression of GUS in hypocotyls of Feronia himonia L.-a fruit tree. IJB 6: 504-507.

Raghunath MK, Lal S & Khurana P 2007. In vitro plant regeneration from different explants of elite mulberry (Morus Sp.) genotypes, AR12, DD and S13. Bangladesh J. Sericulture (invited article).

Ravi V, Khurana JP, Tyagi AK & Khurana P 2007. Rosales sister to Fabales: towards resolving the rosid puzzle. Molecular Phylogenetics and Evolution 44: 488-493.

Ravi V, Khurana JP, Tyagi AK & Khurana P 2007. An update on chloroplast genomes: organization and implications. Plant Systematics & Evolution (DOI 10.1007/s00606-007-0608-0).

Rodrigues V, Bhandari R, Khurana JP, Sharma P & Khurana JP 2007. Movement of chloroplasts in mesophyll cells of Garcinia indica in response to UV-B radiation. Curr. Sci. 92: 1610-1613.

Ray S, Agarwal P, Arora R, Kapoor S & Tyagi AK 2007. Expression profile of calcium-dependent protein kinase gene family during reproductive development and abiotic stress conditions in rice (Oryza sativa L. ssp. Indica). Mol. Gen. Genomics 278: 493-505.

The Rice Annotation Project. 2007. Curated genome annotation of Oryza sativa ssp. Japonica and comparative genome analysis with Arabidopsis thaliana. Genome Res. 17:175-183.

Sahi C, Agarwal M, Singh A & Grover A 2007. Molecular Characterization of a novel isoform of rice (Oryza sativa L.) glycine rich - RNA binding protein and evidence for its involvement in high temperature stress response. Plant Sci. 173: 144-155.

Schaller GE, Dai K, Hwang I, Kieber JJ & Khurana JP 2007. Nomenclature for two-Component signaling elements of Rice. Plant Physiol. 143: 555-557.

Sehgal A, Khurana JP, Sethi M, Ara H & Jain M 2007. Organ identity of the thalloid plant body of Griffthella hookeriana and Polypleurum stylosum - Podostemoideae (Podostemaceae) Plant Syst. Evol. 267: 93-104.

Shalini L & Khurana P 2007. Over-expression of HVA1 gene from barley generates tolerance to salinity and water stress in transgenic mulberry (Morus indica). Transgenic Research (DOI 10.1007/s11248-007-9145-4).

Singh G, Jain M, Kulshreshtha R, Khurana S & Singh P 2007. Expression and analysis of genes encoding translation initiation factor 3 subunit g (TaeIf3g) and vesicle -associated membrane protein-associated protein (TaVAP) in drought tolerant and susceptible cultivars of wheat. Plant Science 173: 660-669.

Singla B, Tyagi AK, Khurana JP & Khurana P 2007. Analysis of expression profile of selected genes expressed during auxin-induced somatic embryogenesis in leaf base system of wheat (Triticum aestivum) and their possible interactions. Plant Mol. Biol. 65: 677-692.

Tyagi AK 2007. Rice genome and beyond. Natl. Acad. Sci. Lett. 30: 191-196.

Tyagi AK, Khurana JP, Khurana P, Kapoor S, Singh VP, Singh AK, Thakur JK, Gupta S, Anand S, Vij S, Jain M, Ray S, Agarwal P, Arora R, Sharma P, Mukherjee S, Nijhawan A, Giri J & Khurana R 2007. Expression and functional analysis of rice genes involved in reproductive development and stress response. In : Rice Genetics V, 313 -330 IRRI, Philippines.

Tyagi AK, Khurana J, Khurana P, Vij S, Jain M & Ravi V 2007. Evolution and phylogenetic relationship of rice genome. In : Sharma AK & Sharma A (eds). Plant Genome : Biodiversity and Evolution (Volume 1E : Phanerogams : Angiosperms) pp. 15-41 Science Publishers, Inc., USA.

Tyagi H, Rajasubramaniam S & Dasgupta I 2007. Regeneration and Agrobacterium - mediated transformation of a popular indica rice variety ADT39. Current Science 93: 678-683.

Vij S & Tyagi AK 2007 Emerging trends in functional genomics of abiotic response in crop plants. Plant Biotech. J. 5:361-380.

Verma V & Dasgupta I 2007. Sequence analysis of the genomes of two Rice tungro spherical virus isolates from India. Archive Virology 152: 645-648.

Verma V & Dasgupta I 2007. Molecular analysis of coat protein genes of Rice tungro spherical virus from eastern and southern India. Indian Phytopathology 60: 99-104.

Verma V & Dasgupta I 2007. Molecular analysis of coat protein genes of Rice tungro spherical virus from eastern and southern India. Indian Phytopathology 60: 99-104.

Borah, B.K., Johnson, A.M.A., Sai G, DVR & Dasgupta, I. 2008. A comparison of four DNA extraction methods for the detection of Citrus yellow mosaic badnavirus from two species of citrus using PCR and dot-blot hybridisation. Journal of Virological Methods 151: 321-324.

Bovill, W.D., Deveshwar, P., Kapoor, S. & Able, J.A. 2008. Whole genome approaches to identify early meiotic gene candidates in cereals. Functional and Integrative Genomics DOI 10.1007/s10142-008-0097-4.

Dasgupta, I. 2008. Cassava Mosaic Disease, In: Govind, P., Rao, S.M., Khurana, P. & Sergio, L. (eds.) Characterization, Diagnosis & Management of Plant Viruses. Vol. 1 Industrial Crops, pp 379-388, Lenardon, Studium Press, Texas, USA.

Jain, M., Tyagi, A.K. & Khurana, J.P. 2008. Genome-wide identification, classification, evolutionary expansion and expression analyses of homeobox genes in rice. FEBS J. 275: 2845-2861.

Kapoor, M., Arora, R., Lama, T., Nijhawan, A., Khurana, J.P., Tyagi, A.K. & Kapoor, S. 2008. Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their ex-pression analysis during reproductive development and stress in rice. BMC Genomics 9: 451.

Khurana, J.P., Tyagi, A.K. & Jain, M. 2008. Regulation of plant development by auxin-induced changes in gene expression and a family of F-box proteins in Arabidopsis and rice. In: Balyan, H.S. and Gupta, P.K. (eds) Proceedings of the National Symposium on "Molecular Basis of Plant Breeding" (In press).

Khurana, P., Chibbar, A., Singla, B., Chauhan, H., Chaudhary, N., Ratnu, V. 2008. Wheat Biotechnology: From genes to genomics. Tree genomics. In: Arya, I.D. & Arya, S. (eds.) pp. 55-65. Utilization of biotechnology in plant sciences. Forest Res. Institute, Dehradun, India.

Khurana, P., Visnudasan, D. & Chibbar, A.K. 2008. Genetic approaches towards overcoming water deficit in plants - special emphasis on LEAs. Physiol. Mol. Biol. Plant 14: 277-298.

Khurana, P. 2008. Rosalyn Sussman Yalow, In: Nobel Laureate woman scientists. The National Academy of Sciences, India, pp. 20-22.

Khurana, P. 2008. Rita Levi-Montaleini, In: Nobel Laureate woman scientists. The National Academy of Sciences, India, pp. 28-30.

Khurana, P. 2008. Christiana Nusslein-Vollard, In: Nobel Laureate woman scientists. The National Academy of Sciences, India, pp. 35-37.

Lal, S., Gulyani, V., & Khurana, P. 2008. Overexpression of HVA1 gene from barley generates tolerance to salinity and water stress in transgenic mulberry (Morus indica). Transgenic Res. 17: 651-663.

Li, L-G. Lubomir, N., Sokolov, Yong-Hua, Yang, Dong-Ping Li, Julie Ting, Pandey, G.K. & Sheng, Luan. A. 2008. Mitochondrial Magnesium Transporter Functions in Arabidopsis Pollen Development. Mol Plant 1: 675-685

Mahajan, S., Pandey, G.K., Tuteja, N. 2008. Calcium- and salt-stress signalling in plants: shedding light on SOS pathway. Arch. Biochem. Biophys. 471: 146-58.

Mir, R.R., Rustgi, S., Sharma, S., Singh, R., Goyal, A., Kumar, J., Gaur, A., Tyagi, A.K., Khan, H., Sinha, M., Balyan, H.S. & Gupta, P.K. 2008. A preliminary genetic analysis of fibre traits and the use of new genomic SSRs for genetic diversity in jute. Euphytica 161: 413-427.

Mittal, D., Borah, B.K. & Dasgupta, I. 2008. Agroinfection of cloned Sri Lankan cassava mosaic virus DNA to Arabidopsis thaliana, Nicotiana tabacum and cassava. Archives Virology 153: 2149-2155.

Nijhawan, A., Jain, M., Tyagi, A.K. & Khurana, J.P. 2008. Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice. Plant Physiol. 146: 1-18.

Pandey, G.K. 2008. Emergence of a Novel Calcium Signaling Pathway in Plants: CBL-CIPK Signaling Network. Physiol. Mol. Biol. Plants 14: 51-68.

Pandey, G. K., Grant, J. J., Cheong, Y.H., Kim, B-G., Li, L. G. & Luan. S., 2008. Calcineurin-B-Like Protein CBL9 Interacts with Target Kinase CIPK3 in the Regulation of ABA Response in Seed Germination. Mol. Plant 1: 238-248.

Ravi, V., Khurana, J.P. Tyagi, A.K. & Khurana, P. 2008. Chloroplast genomes: Organization and implications. Plant Syst. Evol. 271: 101-122.

Singla, B., Khurana, J.P., & Khurana, P. 2008. Characterization of three somatic embryogenesis receptor kinase genes from wheat, Triticum aestivum. Plant Cell Rep 27: 833-843.

Sharma, M.K., Jani, D., Thungapathra, M., Gautam, J.K., Meena, L.S., Singh, Y., Ghosh, A., Tyagi, A.K., & Sharma, A.K. 2008. Expression of accessory colonization factor subunit A (ACFA) of Vibrio cholerae and ACFA fused to cholera toxin B subunit in transgenic tomato (Solanum lycopersicum). J. Biotechnol. 135: 22-27.

Sharma, P., Kumari, H., Kumar, M., Verma, M., Kumari, K., Malhotra, S., Khurana, J., & Lal, R. 2008. From bacterial genomics to metagenomics: concept, tools and recent advances. Indian J. Microbiol 48: 173-194.

Singh, A. & Grover, A. 2008. Genetic engineering for heat tolerance in plants. Physiology and Molecular Biology of Plants 14: 155-166.

Tyagi, A.K., Khurana, J., Khurana, P., Vij, S., Jain, M. & Ravi, V. 2008. Evolution and phylogenetic relationship of rice genome. In: Sharma, A.K. & Sharma, A. (eds). Plant Genome: Biodiversity and Evolution (Volume 1E: Phanerogams: Angiosperms) 15-41. Science Publishers, Inc., USA.

Tyagi, H., Rajasubramaniam, S., Rajam, M.V. & Dasgupta, I. 2008. RNA-interference in rice against Rice tungro bacilliform virus results in its decreased accumulation in inoculated rice plants. Transgenic Research 17: 897-904.

Vij, S. Giri, J., Dansana, P.K., Kapoor, S. & Tyagi, A.K. 2008. The Receptor-Like Cytoplasmic Kinase (OsRLCK) Gene Family in Rice: Organization, Phylogenetic Relationship, and ex-pression during Development and Stress. Molecular Plant 1-19.

Vij, S. & Tyagi, A.K. 2008. A20/AN1 zinc-finger domain-containing proteins in plants and animals represent common elements in stress response. Funct. Integr. Genomics 8: 301-307.

Vyas, S., Gaur, A., Tyagi, A.K. & Purohit, S.D. 2008. Assessment of genetic diversity in Feronia limonia (L.) Swingle populations. International J. Sustainable Forestry 27: 328-342.

Ganesan, U., Suri, S.S., Rajasubramaniam, S., Rajam, M.V. & Dasgupta, I. 2009. Transgenic ex-pression of coat protein gene of Rice tungro bacilliform virus in rice reduces the accumulation of viral DNA in inoculated plants. Virus Genes (in press).

Grover, A., Chandramouli, A., Katiyar-Agarwal, S., Agarwal, M. & Sahi, C., 2009. Transgenic rice for tolerance against abiotic stresses. In: Datta, S.K. (ed.) Rice Improvement in the Genomic Era. pp. 237-267 IRRI Hawarth Press, USA

Gupta, V., Mathur, S., Solanke, A.U., Sharma, M., Kumar, K., Vyas, R., Khurana, S., Khurana, P., Tyagi, J.P. & Sharma, A. K. 2009. Genome analysis and genetic enhancement of tomato Crit. Rev. Biotechnol. 24:1-30.

Jain, M. & Khurana, J.P. 2009. An expression compendium of auxin-responsive genes during reproductive development and abiotic stress in rice. FEBS J. (In press).

Khurana, J.P., Chatterjee, M., Sharma, P., & Kumar, D., 2009. Blue light sensing cryptochromes: Structure-function perspective and their genetic manipulation in plants. Proc. Nat. Acad. Sci, India (in press).

Khurana, P. 2009. Molecular/biotechnological approaches for sustainable agriculture. In: Singh, S.B., Chaurasia, O.P., Yadav, A., Rimando, A.M., Terrill, T.H. (eds.) Advances in Agriculture Environment and Health, pp. 301-308. SS Publishing House, Delhi.

Kathuria, H., Giri, J., Nataraja, K.N., Murata, N., Udayakumar, M. & Tyagi, A.K. 2009. Glycinebetine-induced water-stress tolerance in codA-expressing transgenic indica rice is associated with up-regulation of several stress responsive genes. Plant Biotech (in press).

Lal, S., Ravi, V., Khurana, J.P. & Khurana, P. 2009. Repertoire of leaf expressed sequence tags (ESTs) and partial characterization of stress-related and membrane transporter genes from mulberry (Morus indica L.). Tree Genetics and Genomes (Available online; DOI 10.1007/s11295-008-0192-7).

Mir, R.R., Banerjee, S., Das, M., Gupta, V., Tyagi, A.K., Sinha, M.K., Balyan, H.S. & Gupta, P.K. 2009. Development and characterization of large-scale SSRs in jute. Crop Sci (in press).

Singh, A., Sahi, C. & Grover, A. 2009. Chymotrypsin protease inhibitor gene family in rice: Genomic organization and evidence for the presence of a bidirectional promoter shared between two chymotrypsin protease inhibitor genes. Gene 428: 9-19.

Singla, B., Khurana, J.P. & Khurana, P. 2009. Structural characterization and expression analysis of the SERK gene family in rice (Oryza sativa). Internat. J. Plant Genomics (In press).

The Tomato Genome Sequencing Consortium. A snapshot of the emerging tomato genome sequence.The Plant Genome 2009 in press. (Co-authored as Coordinator of the Indian Initiative on Tomato Genome Sequencing)

Tyagi, H. & Tyagi, A.K. 2009. The role of A20/AN1 zinc-finger protein encoding gene family in biotic stress in rice. Under review.


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